GENE/SNP | Allele | TFs | Protein name | # of Sites | TFBS | Strand |
ADRBK1 | ||||||
rs948988 (A/G) | G | KLF1 | Kruppel-like factor 1 (erythroid) | 1 | tgaCaCaCCga | minus |
Intron 2 | 0.92 | C = 100% | ||||
KLF4 | Kruppel-like factor 4 (gut) | 1 | tcGGtGtgtc | plus | ||
G = 98% | ||||||
KLF5 | Kruppel-like factor 5 (intestinal) | 1 | ccgaCtCCCc | minus | ||
c = 87% | ||||||
rs4370946 (C/T) | C | KLF4 | Kruppel-like factor 4 (gut) | 1 | tGGGaGcGgg | minus |
3’UTR | 0.92 | G = 90% | ||||
KLF5 | Kruppel-like factor 5 (intestinal) | 1 | cccgCtCCCa | plus | ||
c = 88% | ||||||
SP1 | Specificity Protein 1 | 1 | tgcCCgCtccc | plus | ||
C = 99% | ||||||
SP1 | Specificity Protein 1 | 1 | cccgCtCCcag | plus | ||
c = 77% | ||||||
SP2 | Specificity Protein 2 | 1 | tgcCCgCtcccagtg | plus | ||
C = 100% | ||||||
TBXA2R | ||||||
rs2238633 (A/C) | C | KLF4 | Kruppel-like factor 4 (gut) | 1 | aGGGtGgGgt | minus |
Intron 1 | 0.83 | G = 90% | ||||
SP1 | Specificity Protein 1 | 2 | CcCcacCctgc | plus | ||
c = 86% | ||||||
rs4523 (C/T) | T | KLF4 | Kruppel-like factor 4 (gut) | 1 | tGGGtGtata | minus |
c.924T>C | 0.45 | t = 7% | ||||
Exon 3 | ||||||
rs5756 (C/T) | C | KLF4 | Kruppel-like factor 4 (gut) | 4 | cGGGcGtggt | plus |
3’UTR | 0.63 | G = 98% | ||||
VEGFA | ||||||
rs1570360 (A/G) | G | KLF4 | Kruppel-like factor 4 (gut) | 2 | gtGGaGgGGc | plus |
Promoter | 0.78 | G = 98% | ||||
SP1 | Specificity Protein 1 | 1 | CCCcTCCACA | minus | ||
c = 77% | ||||||
rs34357231 (D/I) | I | KLF5 | Kruppel-like factor 5 (intestinal) | 1 | gtccCaCtCt | plus |
Promoter | 0.28 | |||||
KLF5 | Kruppel-like factor 5 (intestinal) | 1 | actcttCCCa | plus | ||
SP1 | Specificity Protein 1 | 1 | gtcCCaCtctt | plus | ||
SP1 | Specificity Protein 1 | 1 | actCttCCcac | plus | ||
(I)nsertation = 18bp (GGTCCCACTCTTCCCACA) |